Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PEX1O43933 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 TSEN15P1-201ENST00000423257 515 ntBASIC15.35■□□□□ 0.05
PEX1O43933 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 AC087641.1-201ENST00000557561 1021 ntBASIC15.35■□□□□ 0.05
PEX1O43933 AL009183.1-201ENST00000603760 355 ntBASIC15.35■□□□□ 0.05
PEX1O43933 AL355385.1-201ENST00000606123 409 ntBASIC15.35■□□□□ 0.05
PEX1O43933 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.35■□□□□ 0.05
PEX1O43933 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.35■□□□□ 0.05
PEX1O43933 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 SLC22A20-204ENST00000530038 1673 ntBASIC15.35■□□□□ 0.05
PEX1O43933 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PEX1O43933 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 AC041040.2-201ENST00000622926 2899 ntBASIC15.34■□□□□ 0.05
PEX1O43933 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 AC079781.5-202ENST00000641784 3743 ntBASIC15.34■□□□□ 0.05
PEX1O43933 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PEX1O43933 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 TFAMP1-201ENST00000412727 736 ntBASIC15.34■□□□□ 0.05
PEX1O43933 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.34■□□□□ 0.05
PEX1O43933 AL645939.2-201ENST00000427340 991 ntBASIC15.34■□□□□ 0.05
PEX1O43933 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.34■□□□□ 0.05
PEX1O43933 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 KRT8P48-201ENST00000515599 1220 ntBASIC15.34■□□□□ 0.05
PEX1O43933 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.34■□□□□ 0.05
PEX1O43933 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.34■□□□□ 0.05
PEX1O43933 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 AC004449.1-201ENST00000564240 433 ntBASIC15.34■□□□□ 0.05
PEX1O43933 RARRES2P8-201ENST00000566335 367 ntBASIC15.34■□□□□ 0.05
PEX1O43933 MPDU1-223ENST00000582151 728 ntBASIC15.34■□□□□ 0.05
PEX1O43933 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PEX1O43933 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.34■□□□□ 0.05
PEX1O43933 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PEX1O43933 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.34■□□□□ 0.05
PEX1O43933 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PEX1O43933 FGD5P1-202ENST00000614866 2498 ntBASIC15.34■□□□□ 0.05
PEX1O43933 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms