Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 AL603832.2-201ENST00000566195 2125 ntBASIC15.62■□□□□ 0.09
MID1O15344 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 CICP6-201ENST00000457191 2729 ntBASIC15.62■□□□□ 0.09
MID1O15344 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MID1O15344 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.62■□□□□ 0.09
MID1O15344 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.62■□□□□ 0.09
MID1O15344 AC007551.1-201ENST00000457394 519 ntBASIC15.62■□□□□ 0.09
MID1O15344 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.62■□□□□ 0.09
MID1O15344 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.62■□□□□ 0.09
MID1O15344 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.62■□□□□ 0.09
MID1O15344 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MID1O15344 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
MID1O15344 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MID1O15344 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MID1O15344 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MID1O15344 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 AC099336.1-201ENST00000417053 1171 ntBASIC15.61■□□□□ 0.09
MID1O15344 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.61■□□□□ 0.09
MID1O15344 RPL7P3-201ENST00000441388 714 ntBASIC15.61■□□□□ 0.09
MID1O15344 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.61■□□□□ 0.09
MID1O15344 GAPDHP40-201ENST00000505218 1006 ntBASIC15.61■□□□□ 0.09
MID1O15344 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.61■□□□□ 0.09
MID1O15344 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.61■□□□□ 0.09
MID1O15344 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.61■□□□□ 0.09
MID1O15344 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 AC010491.1-201ENST00000563101 2797 ntBASIC15.61■□□□□ 0.09
MID1O15344 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MID1O15344 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MID1O15344 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MID1O15344 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MID1O15344 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
MID1O15344 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.6■□□□□ 0.09
MID1O15344 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MID1O15344 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
MID1O15344 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.6■□□□□ 0.09
MID1O15344 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MID1O15344 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms