Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM38O00635 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM38O00635 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRIM38O00635 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TRIM38O00635 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM38O00635 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 AC011495.1-201ENST00000498085 584 ntBASIC15.79■□□□□ 0.12
TRIM38O00635 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM38O00635 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.79■□□□□ 0.12
TRIM38O00635 AC055876.2-201ENST00000531834 546 ntBASIC15.79■□□□□ 0.12
TRIM38O00635 TPRX2P-201ENST00000535362 881 ntBASIC15.79■□□□□ 0.12
TRIM38O00635 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRIM38O00635 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.79■□□□□ 0.12
TRIM38O00635 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRIM38O00635 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.78■□□□□ 0.12
TRIM38O00635 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRIM38O00635 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM38O00635 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRIM38O00635 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM38O00635 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM38O00635 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.78■□□□□ 0.12
TRIM38O00635 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 AC023310.3-201ENST00000557027 670 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 AC100756.1-201ENST00000562736 682 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 AC138749.3-201ENST00000567691 622 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.78■□□□□ 0.12
TRIM38O00635 AC116165.1-201ENST00000611806 668 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 AC067930.6-201ENST00000623257 4947 ntBASIC15.78■□□□□ 0.12
TRIM38O00635 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.78■□□□□ 0.12
TRIM38O00635 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM38O00635 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM38O00635 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRIM38O00635 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.78■□□□□ 0.12
TRIM38O00635 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
TRIM38O00635 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms