Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 RPL13AP25-201ENST00000484130 612 ntBASIC16.44■□□□□ 0.22
CLDN5O00501 AC026410.3-201ENST00000514280 936 ntBASIC16.44■□□□□ 0.22
CLDN5O00501 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN5O00501 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
CLDN5O00501 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN5O00501 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.44■□□□□ 0.22
CLDN5O00501 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
CLDN5O00501 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN5O00501 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
CLDN5O00501 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN5O00501 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN5O00501 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN5O00501 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN5O00501 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN5O00501 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN5O00501 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN5O00501 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 AC010319.3-201ENST00000597028 470 ntBASIC16.43■□□□□ 0.22
CLDN5O00501 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN5O00501 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CLDN5O00501 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 AC136621.1-201ENST00000624017 2304 ntBASIC16.42■□□□□ 0.22
CLDN5O00501 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 SOCS2P1-201ENST00000417727 557 ntBASIC16.42■□□□□ 0.22
CLDN5O00501 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 TTTY23B-201ENST00000442790 549 ntBASIC16.42■□□□□ 0.22
CLDN5O00501 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 GAPDHP40-201ENST00000505218 1006 ntBASIC16.42■□□□□ 0.22
CLDN5O00501 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN5O00501 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN5O00501 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN5O00501 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms