Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 RNA5SP421-201ENST00000516864 134 ntBASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 MIR3909-201ENST00000579518 119 ntBASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 AC020765.3-201ENST00000613051 740 ntBASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 AP001350.2-201ENST00000625104 1094 ntBASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 TCAF2P1-201ENST00000291129 2421 ntBASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
DDX49Q9Y6V7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
DDX49Q9Y6V7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 AC005622.1-201ENST00000636801 1703 ntBASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 AP3S2-216ENST00000617003 1561 ntBASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 AL365209.1-201ENST00000624418 6473 ntBASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
DDX49Q9Y6V7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.88■□□□□ 0.61
DDX49Q9Y6V7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DDX49Q9Y6V7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms