Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AL133267.1-201ENST00000398220 340 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 RPL7P3-201ENST00000441388 714 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AC012441.1-201ENST00000446669 685 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 BCRP2-202ENST00000447763 634 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 BCRP6-201ENST00000510112 632 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 BCRP7-201ENST00000511549 544 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AC026410.3-201ENST00000514280 936 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AP000812.2-201ENST00000538934 718 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CLUHP6-201ENST00000580789 941 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AC007950.2-201ENST00000615045 2347 ntBASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CSNK1G3Q9Y6M4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC092933.1-201ENST00000393644 945 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 BNIP3P42-201ENST00000454982 569 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 RNA5SP412-201ENST00000516234 123 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 BNIP3P29-201ENST00000598302 571 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC011447.5-201ENST00000616168 564 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 AC093525.8-201ENST00000624099 1342 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 HYMAI-201ENST00000635591 3347 ntBASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CSNK1G3Q9Y6M4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CSNK1G3Q9Y6M4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms