Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HMG20AQ9NP66 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 AL356585.2-201ENST00000625078 2396 ntBASIC14.33□□□□□ -0.11
HMG20AQ9NP66 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HMG20AQ9NP66 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 COL6A4P2-202ENST00000504443 2753 ntBASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.33□□□□□ -0.12
HMG20AQ9NP66 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HMG20AQ9NP66 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SAPCD2P3-201ENST00000455031 850 ntBASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 AC004706.3-202ENST00000621574 984 ntBASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms