Protein–RNA interactions for Protein: Q9HCM2

PLXNA4, Plexin-A4, humanhuman

Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA4Q9HCM2 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 MIR6727-201ENST00000620702 65 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AC009090.5-201ENST00000624886 2285 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 PDIA3P2-201ENST00000428073 158 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 MIR3907-201ENST00000579424 151 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AL133499.1-201ENST00000596207 608 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.2■□□□□ 0.18
PLXNA4Q9HCM2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 LINC02199-201ENST00000506655 2702 ntBASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 MIR4683-201ENST00000579659 81 ntBASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.19■□□□□ 0.18
PLXNA4Q9HCM2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 MARK2P5-201ENST00000507649 634 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AL160314.3-201ENST00000556041 767 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 U62317.3-201ENST00000608319 855 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 CHMP1AP1-201ENST00000445563 662 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 LDHBP1-201ENST00000455730 1119 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 MIR5572-201ENST00000583188 137 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AL358472.3-201ENST00000608147 415 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 AC138466.3-201ENST00000619983 221 ntBASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PLXNA4Q9HCM2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms