Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
LRRC3Q9BY71 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 AL138799.1-201ENST00000448213 1675 ntBASIC16.25■□□□□ 0.19
LRRC3Q9BY71 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 AL355994.2-201ENST00000447882 704 ntBASIC16.25■□□□□ 0.19
LRRC3Q9BY71 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 AC025279.2-201ENST00000569730 653 ntBASIC16.25■□□□□ 0.19
LRRC3Q9BY71 MIR4525-201ENST00000580000 75 ntBASIC16.25■□□□□ 0.19
LRRC3Q9BY71 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 RHOXF1P1-202ENST00000635473 501 ntBASIC16.25■□□□□ 0.19
LRRC3Q9BY71 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
LRRC3Q9BY71 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.24■□□□□ 0.19
LRRC3Q9BY71 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.24■□□□□ 0.19
LRRC3Q9BY71 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 AP005019.2-201ENST00000615104 511 ntBASIC16.24■□□□□ 0.19
LRRC3Q9BY71 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRRC3Q9BY71 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms