Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 AC140479.7-201ENST00000636301 2332 ntBASIC12.76□□□□□ -0.37
RAB40CQ96S21 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 AC108073.2-201ENST00000464002 357 ntBASIC12.76□□□□□ -0.37
RAB40CQ96S21 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 AC004790.2-201ENST00000623588 572 ntBASIC12.76□□□□□ -0.37
RAB40CQ96S21 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 BNIP3P1-202ENST00000550043 1585 ntBASIC12.76□□□□□ -0.37
RAB40CQ96S21 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RAB40CQ96S21 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.76□□□□□ -0.37
RAB40CQ96S21 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC092474.2-201ENST00000424288 719 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 PRSS29P-201ENST00000440800 595 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 CICP4-201ENST00000447359 2812 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AF186996.4-201ENST00000467186 377 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 PRYP6-201ENST00000514804 343 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC024267.1-201ENST00000582320 895 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.75□□□□□ -0.37
RAB40CQ96S21 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RAB40CQ96S21 AC008735.5-201ENST00000623544 497 ntBASIC12.75□□□□□ -0.37
RAB40CQ96S21 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 302.6 ms