Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AC132872.4-202ENST00000622924 2756 ntBASIC16.12■□□□□ 0.17
RPRD1AQ96P16 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 RN7SL692P-201ENST00000464677 288 ntBASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ELK1P1-201ENST00000485699 580 ntBASIC16.11■□□□□ 0.17
RPRD1AQ96P16 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 AL358472.5-202ENST00000641448 1267 ntBASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RPRD1AQ96P16 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AC000095.1-201ENST00000603208 874 ntBASIC16.1■□□□□ 0.17
RPRD1AQ96P16 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 AC009090.5-201ENST00000624886 2285 ntBASIC16.1■□□□□ 0.17
RPRD1AQ96P16 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RPRD1AQ96P16 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 PKD1P5-201ENST00000532415 10291 ntBASIC16.09■□□□□ 0.17
RPRD1AQ96P16 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 CTBP2P3-201ENST00000585629 1255 ntBASIC16.09■□□□□ 0.17
RPRD1AQ96P16 TMEM261P1-201ENST00000604899 340 ntBASIC16.09■□□□□ 0.17
RPRD1AQ96P16 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.09■□□□□ 0.17
RPRD1AQ96P16 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms