Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDND2Q8NHS1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CLDND2Q8NHS1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TCAF2P1-201ENST00000291129 2421 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC098614.1-201ENST00000368528 745 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 DGCR5-201ENST00000399539 862 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC008494.3-201ENST00000606615 944 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC007431.3-201ENST00000623221 587 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AL592424.1-201ENST00000563624 1536 ntBASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CLDND2Q8NHS1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 SLC7A15P-201ENST00000424028 1363 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 FO393414.2-201ENST00000405153 598 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AL589987.1-201ENST00000453380 819 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 WASH4P-201ENST00000564273 1246 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AC025048.3-201ENST00000590609 569 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AC074044.1-201ENST00000609673 707 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 AC005702.4-201ENST00000618393 416 ntBASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CLDND2Q8NHS1 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms