Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AL359711.2-201ENST00000563105 872 ntBASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AC016629.1-201ENST00000596579 586 ntBASIC16.63■□□□□ 0.25
RNF135Q8IUD6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 AC026691.1-201ENST00000602502 2017 ntBASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.63■□□□□ 0.25
RNF135Q8IUD6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.63■□□□□ 0.25
RNF135Q8IUD6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AC026954.1-201ENST00000429771 1293 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 FTH1P14-201ENST00000482930 551 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 AL391069.4-201ENST00000609583 481 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 REXO1L8P-201ENST00000604378 1897 ntBASIC16.62■□□□□ 0.25
RNF135Q8IUD6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.62■□□□□ 0.25
RNF135Q8IUD6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AC132872.4-202ENST00000622924 2756 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
RNF135Q8IUD6 FO393414.2-201ENST00000405153 598 ntBASIC16.61■□□□□ 0.25
RNF135Q8IUD6 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms