Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIF1Q5UIP0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 AL450472.2-201ENST00000603663 1156 ntBASIC14.93□□□□□ -0.02
RIF1Q5UIP0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 LINC01815-202ENST00000641468 1409 ntBASIC14.93□□□□□ -0.02
RIF1Q5UIP0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 AP001282.1-201ENST00000531301 1499 ntBASIC14.93□□□□□ -0.02
RIF1Q5UIP0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.93□□□□□ -0.02
RIF1Q5UIP0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIF1Q5UIP0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 RPL8P2-201ENST00000430538 502 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 MIR4472-1-201ENST00000584349 80 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 IL9RP3-201ENST00000442856 1674 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC009779.1-201ENST00000551138 283 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 OR10B1P-201ENST00000601666 907 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 LINC01144-201ENST00000626198 1710 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 AC067852.2-201ENST00000590513 2313 ntBASIC14.92□□□□□ -0.02
RIF1Q5UIP0 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIF1Q5UIP0 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 NHP2-202ENST00000314397 599 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
RIF1Q5UIP0 AC006548.2-201ENST00000605217 529 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms