Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AL627422.1-201ENST00000434104 580 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 RBM8B-201ENST00000555532 525 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 RN7SL163P-201ENST00000583100 276 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 MIR6816-201ENST00000620368 66 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 LINC00431-202ENST00000636375 159 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 BCAS2P2-201ENST00000425064 674 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 AC011247.3-201ENST00000603297 438 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 PEBP1P2-201ENST00000603980 558 ntBASIC13.32□□□□□ -0.28
LRRK2Q5S007 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 KRT8P14-201ENST00000414254 1442 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AC009093.2-202ENST00000620513 2079 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AL627231.1-201ENST00000394467 1125 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 THY1-209ENST00000580275 578 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AL136295.7-201ENST00000619226 1200 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AQP7P5-201ENST00000428759 1049 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 AQP7P4-201ENST00000447083 1042 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AQP7P2-201ENST00000453967 1041 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 RN7SL396P-201ENST00000471086 295 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
LRRK2Q5S007 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 AL157813.1-201ENST00000612996 587 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 AQP7P3-201ENST00000624547 1041 ntBASIC13.31□□□□□ -0.28
LRRK2Q5S007 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.31□□□□□ -0.28
LRRK2Q5S007 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.3□□□□□ -0.28
LRRK2Q5S007 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LRRK2Q5S007 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms