Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AC005229.1-201ENST00000392885 409 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AC104457.1-201ENST00000401024 814 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AC012441.1-201ENST00000446669 685 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 GPR53P-205ENST00000457298 1084 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AP001582.1-201ENST00000525856 295 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AC093525.8-201ENST00000624099 1342 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 AC092850.2-201ENST00000623821 2697 ntBASIC21.44■■□□□ 1.02
CDCA8Q53HL2 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC21.44■■□□□ 1.02
CDCA8Q53HL2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 GK-202ENST00000378941 458 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 KRT43P-201ENST00000434019 910 ntBASIC21.43■■□□□ 1.02
CDCA8Q53HL2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CDCA8Q53HL2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 AL022328.1-201ENST00000610050 478 ntBASIC21.42■■□□□ 1.02
CDCA8Q53HL2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 PRSS30P-206ENST00000641773 873 ntBASIC21.42■■□□□ 1.02
CDCA8Q53HL2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CDCA8Q53HL2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA8Q53HL2 AC007950.2-201ENST00000615045 2347 ntBASIC21.41■■□□□ 1.02
CDCA8Q53HL2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA8Q53HL2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDCA8Q53HL2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC21.41■■□□□ 1.02
CDCA8Q53HL2 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
CDCA8Q53HL2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms