Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
IRX3P78415 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
IRX3P78415 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
IRX3P78415 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.27■□□□□ 0.51
IRX3P78415 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
IRX3P78415 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC18.27■□□□□ 0.51
IRX3P78415 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
IRX3P78415 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
IRX3P78415 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 AC134312.5-201ENST00000568031 1313 ntBASIC18.26■□□□□ 0.51
IRX3P78415 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 AC136604.1-201ENST00000418535 575 ntBASIC18.26■□□□□ 0.51
IRX3P78415 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 AC012441.1-201ENST00000446669 685 ntBASIC18.26■□□□□ 0.51
IRX3P78415 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 FTH1P14-201ENST00000482930 551 ntBASIC18.26■□□□□ 0.51
IRX3P78415 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.26■□□□□ 0.51
IRX3P78415 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.26■□□□□ 0.51
IRX3P78415 AP000812.2-201ENST00000538934 718 ntBASIC18.26■□□□□ 0.51
IRX3P78415 AP001063.1-201ENST00000568332 529 ntBASIC18.26■□□□□ 0.51
IRX3P78415 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
IRX3P78415 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.26■□□□□ 0.51
IRX3P78415 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
IRX3P78415 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.26■□□□□ 0.51
IRX3P78415 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX3P78415 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
IRX3P78415 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX3P78415 AC016694.1-201ENST00000434179 700 ntBASIC18.25■□□□□ 0.51
IRX3P78415 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX3P78415 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX3P78415 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 HNRNPUP1-201ENST00000554987 333 ntBASIC18.25■□□□□ 0.51
IRX3P78415 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.25■□□□□ 0.51
IRX3P78415 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX3P78415 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
IRX3P78415 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX3P78415 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.25■□□□□ 0.51
IRX3P78415 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.25■□□□□ 0.51
IRX3P78415 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
IRX3P78415 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
IRX3P78415 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.24■□□□□ 0.51
IRX3P78415 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms