Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RHBDL3P58872 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC18.28■□□□□ 0.52
RHBDL3P58872 AL365203.3-201ENST00000609742 2057 ntBASIC18.28■□□□□ 0.52
RHBDL3P58872 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.28■□□□□ 0.52
RHBDL3P58872 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 MIR4741-201ENST00000579822 90 ntBASIC18.28■□□□□ 0.52
RHBDL3P58872 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.28■□□□□ 0.52
RHBDL3P58872 ENPP7P14-201ENST00000621765 1040 ntBASIC18.28■□□□□ 0.52
RHBDL3P58872 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.28■□□□□ 0.52
RHBDL3P58872 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RHBDL3P58872 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.28■□□□□ 0.52
RHBDL3P58872 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
RHBDL3P58872 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDL3P58872 RPL5P21-201ENST00000404620 815 ntBASIC18.27■□□□□ 0.52
RHBDL3P58872 HLA-K-203ENST00000430151 1046 ntBASIC18.27■□□□□ 0.52
RHBDL3P58872 PFN1P12-201ENST00000455938 534 ntBASIC18.27■□□□□ 0.52
RHBDL3P58872 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC18.27■□□□□ 0.52
RHBDL3P58872 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
RHBDL3P58872 ACR-203ENST00000529621 708 ntTSL 5 BASIC18.27■□□□□ 0.52
RHBDL3P58872 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.27■□□□□ 0.52
RHBDL3P58872 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.27■□□□□ 0.52
RHBDL3P58872 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC18.27■□□□□ 0.52
RHBDL3P58872 KLK3-211ENST00000597483 810 ntTSL 2 BASIC18.27■□□□□ 0.52
RHBDL3P58872 AC091271.1-201ENST00000611877 1162 ntBASIC18.27■□□□□ 0.52
RHBDL3P58872 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.27■□□□□ 0.52
RHBDL3P58872 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RHBDL3P58872 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 LRRC59-203ENST00000576448 1531 ntBASIC18.27■□□□□ 0.51
RHBDL3P58872 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.27■□□□□ 0.51
RHBDL3P58872 PRAL-201ENST00000624952 3286 ntBASIC18.27■□□□□ 0.51
RHBDL3P58872 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RHBDL3P58872 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 POM121L8P-201ENST00000417732 1281 ntBASIC18.26■□□□□ 0.51
RHBDL3P58872 POM121L9P-203ENST00000441984 1285 ntBASIC18.26■□□□□ 0.51
RHBDL3P58872 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.26■□□□□ 0.51
RHBDL3P58872 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.26■□□□□ 0.51
RHBDL3P58872 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.26■□□□□ 0.51
RHBDL3P58872 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 AC244093.1-201ENST00000610837 814 ntBASIC18.26■□□□□ 0.51
RHBDL3P58872 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RHBDL3P58872 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RHBDL3P58872 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
RHBDL3P58872 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms