Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK7P50613 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK7P50613 HIST2H2BC-201ENST00000498492 580 ntBASIC17.22■□□□□ 0.35
CDK7P50613 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC17.22■□□□□ 0.35
CDK7P50613 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK7P50613 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC17.22■□□□□ 0.35
CDK7P50613 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.22■□□□□ 0.35
CDK7P50613 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK7P50613 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 AC018735.1-201ENST00000437208 1502 ntBASIC17.21■□□□□ 0.35
CDK7P50613 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 AL662890.1-201ENST00000396818 632 ntBASIC17.21■□□□□ 0.35
CDK7P50613 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.21■□□□□ 0.35
CDK7P50613 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 AL590640.2-201ENST00000457038 527 ntBASIC17.21■□□□□ 0.35
CDK7P50613 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.21■□□□□ 0.35
CDK7P50613 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.21■□□□□ 0.35
CDK7P50613 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 AC105129.2-201ENST00000559536 390 ntBASIC17.21■□□□□ 0.35
CDK7P50613 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDK7P50613 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CDK7P50613 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.21■□□□□ 0.35
CDK7P50613 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.34
CDK7P50613 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDK7P50613 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDK7P50613 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDK7P50613 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK7P50613 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.2■□□□□ 0.34
CDK7P50613 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 MIR663B-201ENST00000408361 115 ntBASIC17.2■□□□□ 0.34
CDK7P50613 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.2■□□□□ 0.34
CDK7P50613 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.2■□□□□ 0.34
CDK7P50613 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.2■□□□□ 0.34
CDK7P50613 MIR3619-201ENST00000579667 83 ntBASIC17.2■□□□□ 0.34
CDK7P50613 AC020914.3-201ENST00000594712 304 ntBASIC17.2■□□□□ 0.34
CDK7P50613 BX539320.1-201ENST00000623759 877 ntBASIC17.2■□□□□ 0.34
CDK7P50613 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDK7P50613 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms