Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 AC013268.4-201ENST00000637413 2228 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
HMGCLP35914 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 AC007541.1-201ENST00000570282 1469 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 AC087499.6-201ENST00000411576 835 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 PIN1P1-201ENST00000412108 996 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 TERF1P3-201ENST00000505638 1227 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.55■□□□□ 0.08
HMGCLP35914 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 AL132655.2-201ENST00000596276 594 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 AC025181.2-201ENST00000606994 802 ntBASIC15.55■□□□□ 0.08
HMGCLP35914 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HMGCLP35914 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.55■□□□□ 0.08
HMGCLP35914 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HMGCLP35914 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGCLP35914 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 FAM86LP-201ENST00000478302 853 ntBASIC15.54■□□□□ 0.08
HMGCLP35914 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGCLP35914 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.54■□□□□ 0.08
HMGCLP35914 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.54■□□□□ 0.08
HMGCLP35914 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.54■□□□□ 0.08
HMGCLP35914 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.54■□□□□ 0.08
HMGCLP35914 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HMGCLP35914 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HMGCLP35914 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HMGCLP35914 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.53■□□□□ 0.08
HMGCLP35914 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms