Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC093214.1-201ENST00000511688 1107 ntBASIC14.41□□□□□ -0.1
SHC1P29353 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.41□□□□□ -0.1
SHC1P29353 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.41□□□□□ -0.1
SHC1P29353 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.41□□□□□ -0.1
SHC1P29353 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.41□□□□□ -0.1
SHC1P29353 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.41□□□□□ -0.1
SHC1P29353 REXO1L1P-202ENST00000608646 1974 ntBASIC14.41□□□□□ -0.1
SHC1P29353 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.41□□□□□ -0.1
SHC1P29353 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.41□□□□□ -0.1
SHC1P29353 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.41□□□□□ -0.1
SHC1P29353 TMBIM7P-203ENST00000641617 1718 ntBASIC14.41□□□□□ -0.1
SHC1P29353 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHC1P29353 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.4□□□□□ -0.1
SHC1P29353 TSSK5P-201ENST00000423978 907 ntBASIC14.4□□□□□ -0.1
SHC1P29353 EEF1DP4-201ENST00000446006 880 ntBASIC14.4□□□□□ -0.1
SHC1P29353 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.4□□□□□ -0.1
SHC1P29353 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SHC1P29353 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 AL590560.3-201ENST00000623350 461 ntBASIC14.4□□□□□ -0.1
SHC1P29353 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
SHC1P29353 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHC1P29353 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.4□□□□□ -0.1
SHC1P29353 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
SHC1P29353 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.39□□□□□ -0.11
SHC1P29353 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.39□□□□□ -0.11
SHC1P29353 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.39□□□□□ -0.11
SHC1P29353 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.39□□□□□ -0.11
SHC1P29353 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.39□□□□□ -0.11
SHC1P29353 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.39□□□□□ -0.11
SHC1P29353 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms