Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SYN1P17600 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.82■□□□□ 0.28
SYN1P17600 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.81■□□□□ 0.28
SYN1P17600 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 GHSR-202ENST00000427970 912 ntBASIC16.81■□□□□ 0.28
SYN1P17600 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.81■□□□□ 0.28
SYN1P17600 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 AC090857.1-201ENST00000527400 390 ntBASIC16.81■□□□□ 0.28
SYN1P17600 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.81■□□□□ 0.28
SYN1P17600 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.81■□□□□ 0.28
SYN1P17600 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 AC127024.7-201ENST00000625101 200 ntBASIC16.81■□□□□ 0.28
SYN1P17600 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.81■□□□□ 0.28
SYN1P17600 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.81■□□□□ 0.28
SYN1P17600 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SYN1P17600 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
SYN1P17600 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 TBC1D3J-201ENST00000620719 1426 ntBASIC16.8■□□□□ 0.28
SYN1P17600 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SYN1P17600 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.8■□□□□ 0.28
SYN1P17600 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 AC073150.1-201ENST00000450406 1084 ntBASIC16.8■□□□□ 0.28
SYN1P17600 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 AC079112.1-201ENST00000454972 939 ntBASIC16.8■□□□□ 0.28
SYN1P17600 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.8■□□□□ 0.28
SYN1P17600 RBM8B-201ENST00000555532 525 ntBASIC16.8■□□□□ 0.28
SYN1P17600 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
SYN1P17600 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC16.8■□□□□ 0.28
SYN1P17600 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.8■□□□□ 0.28
SYN1P17600 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
SYN1P17600 AC007718.1-201ENST00000621078 280 ntBASIC16.8■□□□□ 0.28
SYN1P17600 YRDCP1-201ENST00000621419 643 ntBASIC16.8■□□□□ 0.28
SYN1P17600 AC068587.8-201ENST00000641239 219 ntBASIC16.8■□□□□ 0.28
SYN1P17600 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.8■□□□□ 0.28
SYN1P17600 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
SYN1P17600 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SYN1P17600 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SYN1P17600 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYN1P17600 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SYN1P17600 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms