Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.14■□□□□ 0.01
SP9P0CG40 PIN4P1-201ENST00000451079 396 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 MESTP3-201ENST00000503460 968 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.14■□□□□ 0.01
SP9P0CG40 AC009779.1-201ENST00000551138 283 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.14■□□□□ 0.01
SP9P0CG40 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.14■□□□□ 0.01
SP9P0CG40 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.14■□□□□ 0.01
SP9P0CG40 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.14■□□□□ 0.01
SP9P0CG40 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 AC138894.2-201ENST00000602838 371 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.14■□□□□ 0.01
SP9P0CG40 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 AC007718.1-201ENST00000621078 280 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 AC127024.7-201ENST00000625101 200 ntBASIC15.14■□□□□ 0.01
SP9P0CG40 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SP9P0CG40 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SP9P0CG40 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.14■□□□□ 0.01
SP9P0CG40 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SP9P0CG40 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SP9P0CG40 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.13■□□□□ 0.01
SP9P0CG40 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.13■□□□□ 0.01
SP9P0CG40 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.13■□□□□ 0.01
SP9P0CG40 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 AC010234.1-201ENST00000494599 870 ntBASIC15.13■□□□□ 0.01
SP9P0CG40 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC15.13■□□□□ 0.01
SP9P0CG40 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.13■□□□□ 0.01
SP9P0CG40 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.13■□□□□ 0.01
SP9P0CG40 RBM8B-201ENST00000555532 525 ntBASIC15.13■□□□□ 0.01
SP9P0CG40 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC15.13■□□□□ 0.01
SP9P0CG40 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 AL358472.3-201ENST00000608147 415 ntBASIC15.13■□□□□ 0.01
SP9P0CG40 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 AC011477.6-201ENST00000604980 1927 ntBASIC15.13■□□□□ 0.01
SP9P0CG40 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.13■□□□□ 0.01
SP9P0CG40 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SP9P0CG40 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SP9P0CG40 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.12■□□□□ 0.01
SP9P0CG40 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SP9P0CG40 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SP9P0CG40 AC090340.1-201ENST00000620778 4980 ntBASIC15.12■□□□□ 0.01
SP9P0CG40 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms