Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 CICP14-201ENST00000629111 2732 ntBASIC16.53■□□□□ 0.24
RTN3O95197 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 AC098850.1-201ENST00000419919 790 ntBASIC16.53■□□□□ 0.24
RTN3O95197 KRT17P7-201ENST00000451704 1104 ntBASIC16.53■□□□□ 0.24
RTN3O95197 RN7SL752P-201ENST00000463779 287 ntBASIC16.53■□□□□ 0.24
RTN3O95197 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RTN3O95197 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RTN3O95197 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.53■□□□□ 0.24
RTN3O95197 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.53■□□□□ 0.24
RTN3O95197 MIR4313-201ENST00000580760 101 ntBASIC16.53■□□□□ 0.24
RTN3O95197 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RTN3O95197 AC112504.1-201ENST00000623415 1841 ntBASIC16.53■□□□□ 0.24
RTN3O95197 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RTN3O95197 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RTN3O95197 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 AC126177.1-201ENST00000547829 2218 ntBASIC16.53■□□□□ 0.24
RTN3O95197 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RTN3O95197 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.53■□□□□ 0.24
RTN3O95197 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
RTN3O95197 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.52■□□□□ 0.24
RTN3O95197 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RTN3O95197 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.52■□□□□ 0.24
RTN3O95197 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.52■□□□□ 0.24
RTN3O95197 KRT18P43-201ENST00000469825 1281 ntBASIC16.52■□□□□ 0.24
RTN3O95197 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RTN3O95197 AC092552.1-201ENST00000547243 906 ntBASIC16.52■□□□□ 0.24
RTN3O95197 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.52■□□□□ 0.24
RTN3O95197 AL603832.2-201ENST00000566195 2125 ntBASIC16.52■□□□□ 0.23
RTN3O95197 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.52■□□□□ 0.23
RTN3O95197 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RTN3O95197 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
RTN3O95197 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 AL009178.2-201ENST00000597278 2719 ntBASIC16.52■□□□□ 0.23
RTN3O95197 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RTN3O95197 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RTN3O95197 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.51■□□□□ 0.23
RTN3O95197 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RTN3O95197 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms