Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC104457.1-201ENST00000401024 814 ntBASIC18.7■□□□□ 0.58
SEMA3EO15041 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA3EO15041 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA3EO15041 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 AL583810.1-201ENST00000553344 1045 ntBASIC18.7■□□□□ 0.58
SEMA3EO15041 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.7■□□□□ 0.58
SEMA3EO15041 MIR6799-201ENST00000620297 69 ntBASIC18.7■□□□□ 0.58
SEMA3EO15041 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SEMA3EO15041 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.7■□□□□ 0.58
SEMA3EO15041 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.7■□□□□ 0.58
SEMA3EO15041 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SEMA3EO15041 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 AC006001.1-201ENST00000325130 474 ntBASIC18.69■□□□□ 0.58
SEMA3EO15041 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 AL139094.1-201ENST00000405549 1188 ntBASIC18.69■□□□□ 0.58
SEMA3EO15041 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.69■□□□□ 0.58
SEMA3EO15041 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 AC008687.7-202ENST00000637404 953 ntBASIC18.69■□□□□ 0.58
SEMA3EO15041 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.69■□□□□ 0.58
SEMA3EO15041 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 TUBB1P2-201ENST00000422712 1306 ntBASIC18.69■□□□□ 0.58
SEMA3EO15041 TUBB1P1-201ENST00000503144 1300 ntBASIC18.69■□□□□ 0.58
SEMA3EO15041 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SEMA3EO15041 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SEMA3EO15041 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA3EO15041 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SEMA3EO15041 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 RPS15-201ENST00000233609 534 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA3EO15041 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SEMA3EO15041 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.68■□□□□ 0.58
SEMA3EO15041 FAM21FP-201ENST00000426241 1131 ntBASIC18.68■□□□□ 0.58
SEMA3EO15041 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.68■□□□□ 0.58
SEMA3EO15041 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SEMA3EO15041 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 SAMD11P1-201ENST00000571429 661 ntBASIC18.68■□□□□ 0.58
SEMA3EO15041 RPS15-205ENST00000586686 562 ntTSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.68■□□□□ 0.58
SEMA3EO15041 RPS15-208ENST00000591804 711 ntTSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms