Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 FAM90A25P-201ENST00000528404 1395 ntBASIC21.14■□□□□ 0.97
CHD2O14647 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.14■□□□□ 0.97
CHD2O14647 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHD2O14647 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHD2O14647 AL138725.1-201ENST00000407347 1314 ntBASIC21.14■□□□□ 0.97
CHD2O14647 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHD2O14647 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CHD2O14647 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 RPL7P35-201ENST00000446943 740 ntBASIC21.13■□□□□ 0.97
CHD2O14647 AC130709.1-201ENST00000484779 1212 ntBASIC21.13■□□□□ 0.97
CHD2O14647 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD2O14647 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD2O14647 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CHD2O14647 AC127024.7-201ENST00000625101 200 ntBASIC21.13■□□□□ 0.97
CHD2O14647 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 SERF2-209ENST00000409646 559 ntTSL 4 BASIC21.13■□□□□ 0.97
CHD2O14647 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC21.13■□□□□ 0.97
CHD2O14647 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC21.13■□□□□ 0.97
CHD2O14647 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHD2O14647 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CHD2O14647 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CHD2O14647 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 AC006058.4-201ENST00000624016 1670 ntBASIC21.12■□□□□ 0.97
CHD2O14647 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CHD2O14647 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD2O14647 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 RN7SKP230-201ENST00000365642 335 ntBASIC21.12■□□□□ 0.97
CHD2O14647 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC21.12■□□□□ 0.97
CHD2O14647 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC21.12■□□□□ 0.97
CHD2O14647 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC21.12■□□□□ 0.97
CHD2O14647 NAT9-220ENST00000582870 896 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD2O14647 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC21.12■□□□□ 0.97
CHD2O14647 AC025262.2-201ENST00000623975 1056 ntBASIC21.12■□□□□ 0.97
CHD2O14647 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CHD2O14647 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHD2O14647 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 AC079112.1-201ENST00000454972 939 ntBASIC21.11■□□□□ 0.97
CHD2O14647 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD2O14647 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CHD2O14647 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHD2O14647 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD2O14647 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 MST1L-201ENST00000442552 2185 ntBASIC21.11■□□□□ 0.97
CHD2O14647 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.11■□□□□ 0.97
CHD2O14647 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD2O14647 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD2O14647 AL157407.1-201ENST00000435784 904 ntBASIC21.11■□□□□ 0.97
CHD2O14647 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD2O14647 AP000358.1-201ENST00000456260 156 ntBASIC21.11■□□□□ 0.97
CHD2O14647 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD2O14647 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD2O14647 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD2O14647 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHD2O14647 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 AL157414.3-201ENST00000624276 1954 ntBASIC21.1■□□□□ 0.97
CHD2O14647 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD2O14647 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC21.1■□□□□ 0.97
CHD2O14647 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms