Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRIM38O00635 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.82■□□□□ 0.12
TRIM38O00635 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.82■□□□□ 0.12
TRIM38O00635 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TRIM38O00635 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
TRIM38O00635 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.81■□□□□ 0.12
TRIM38O00635 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 SDHAP3-202ENST00000515467 728 ntBASIC15.81■□□□□ 0.12
TRIM38O00635 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 PCGF3-213ENST00000620529 1899 ntBASIC15.81■□□□□ 0.12
TRIM38O00635 LINC01144-201ENST00000626198 1710 ntBASIC15.81■□□□□ 0.12
TRIM38O00635 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.81■□□□□ 0.12
TRIM38O00635 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.81■□□□□ 0.12
TRIM38O00635 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRIM38O00635 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM38O00635 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM38O00635 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRIM38O00635 MIR648-201ENST00000385046 94 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 HLA-V-201ENST00000429037 534 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 AL589987.1-201ENST00000453380 819 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM38O00635 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.8■□□□□ 0.12
TRIM38O00635 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.8■□□□□ 0.12
TRIM38O00635 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 AL109936.8-201ENST00000641772 604 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 AP002414.2-201ENST00000591780 3365 ntBASIC15.8■□□□□ 0.12
TRIM38O00635 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.8■□□□□ 0.12
TRIM38O00635 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
TRIM38O00635 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRIM38O00635 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms