Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 AC092933.1-201ENST00000393644 945 ntBASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 TDH-203ENST00000531764 1110 ntBASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.8■□□□□ 0.92
NPC1L1Q9UHC9 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 FES-204ENST00000414248 2327 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 MST1L-201ENST00000442552 2185 ntBASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 GK-202ENST00000378941 458 ntTSL 3 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 KRT17P7-201ENST00000451704 1104 ntBASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 AC106760.1-201ENST00000508690 800 ntBASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.79■□□□□ 0.92
NPC1L1Q9UHC9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 KRT8P35-201ENST00000483942 1338 ntBASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 AL162274.1-201ENST00000617191 1098 ntBASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 AC132872.4-202ENST00000622924 2756 ntBASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
NPC1L1Q9UHC9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 AC023157.3-201ENST00000619086 2088 ntBASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 BTNL10-201ENST00000595971 695 ntBASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
NPC1L1Q9UHC9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms