Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 AC074044.1-201ENST00000609673 707 ntBASIC14.99□□□□□ -0.01
BRF2Q9HAW0 AC073592.8-201ENST00000624126 511 ntBASIC14.99□□□□□ -0.01
BRF2Q9HAW0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
BRF2Q9HAW0 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 TNRC18P2-201ENST00000417666 2714 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AL512361.1-201ENST00000554200 418 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AC010336.2-201ENST00000564226 506 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AC004449.1-201ENST00000564240 433 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AC140878.1-201ENST00000565277 250 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AC051619.7-201ENST00000568314 623 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 MROH4P-201ENST00000431302 1578 ntBASIC14.98□□□□□ -0.01
BRF2Q9HAW0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.98□□□□□ -0.01
BRF2Q9HAW0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 AC068587.6-202ENST00000641839 5619 ntBASIC14.97□□□□□ -0.01
BRF2Q9HAW0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BRF2Q9HAW0 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms