Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.02■□□□□ 0.31
HIPK3Q9H422 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.02■□□□□ 0.31
HIPK3Q9H422 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK3Q9H422 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 HINT2P1-201ENST00000419438 481 ntBASIC17.01■□□□□ 0.31
HIPK3Q9H422 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AC114812.1-204ENST00000449669 728 ntBASIC17.01■□□□□ 0.31
HIPK3Q9H422 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 MIR6727-201ENST00000620702 65 ntBASIC17.01■□□□□ 0.31
HIPK3Q9H422 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK3Q9H422 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HIPK3Q9H422 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIPK3Q9H422 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HIPK3Q9H422 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 FXNP2-201ENST00000411625 547 ntBASIC17■□□□□ 0.31
HIPK3Q9H422 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17■□□□□ 0.31
HIPK3Q9H422 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC17■□□□□ 0.31
HIPK3Q9H422 AL023775.1-201ENST00000454907 1746 ntBASIC17■□□□□ 0.31
HIPK3Q9H422 RN7SL769P-201ENST00000469386 295 ntBASIC17■□□□□ 0.31
HIPK3Q9H422 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
HIPK3Q9H422 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC17■□□□□ 0.31
HIPK3Q9H422 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17■□□□□ 0.31
HIPK3Q9H422 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17■□□□□ 0.31
HIPK3Q9H422 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK3Q9H422 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 KRT8P19-201ENST00000551916 1455 ntBASIC16.99■□□□□ 0.31
HIPK3Q9H422 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIPK3Q9H422 KRTAP19-9P-201ENST00000421795 191 ntBASIC16.99■□□□□ 0.31
HIPK3Q9H422 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 MPRIPP1-201ENST00000452433 1089 ntBASIC16.99■□□□□ 0.31
HIPK3Q9H422 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.99■□□□□ 0.31
HIPK3Q9H422 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms