Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC099522.2-201ENST00000607001 744 ntBASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC091812.2-201ENST00000619081 385 ntBASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC055717.3-201ENST00000622967 595 ntBASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AC041040.2-201ENST00000622926 2899 ntBASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.72□□□□□ -0.05
AMBRA1Q9C0C7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 FAM58CP-201ENST00000435741 640 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC112191.1-201ENST00000523689 701 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC105233.2-201ENST00000523697 349 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AF228730.5-201ENST00000530288 346 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 MIR3197-201ENST00000582241 73 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 AC092902.6-201ENST00000641783 218 ntBASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
AMBRA1Q9C0C7 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
AMBRA1Q9C0C7 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 ELL2P1-201ENST00000413990 1906 ntBASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 AC140479.7-201ENST00000636301 2332 ntBASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
AMBRA1Q9C0C7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms