Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 EIF3FP3-201ENST00000434851 1086 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 IMP3P2-201ENST00000489760 475 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 MIR4722-201ENST00000578292 60 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 PPY2P-201ENST00000582808 702 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 KLK3-207ENST00000595952 969 ntTSL 3 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 AC020916.1-201ENST00000587762 1774 ntBASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RTFDC1Q9BY42 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 AC022188.1-201ENST00000620960 1664 ntBASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 GGCT-203ENST00000409144 836 ntTSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.77■□□□□ 0.6
RTFDC1Q9BY42 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTFDC1Q9BY42 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
RTFDC1Q9BY42 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RTFDC1Q9BY42 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 LINC02447-202ENST00000501888 2146 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 HINT2P1-201ENST00000419438 481 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 CHMP1AP1-201ENST00000445563 662 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 SPTLC1P5-201ENST00000450718 252 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 AC004066.1-201ENST00000502488 802 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 ZACNP1-201ENST00000612259 710 ntBASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTFDC1Q9BY42 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 TUBBP5-203ENST00000508529 1334 ntBASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 AL158070.2-201ENST00000623713 1621 ntBASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.75■□□□□ 0.59
RTFDC1Q9BY42 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms