Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 CSH2-202ENST00000345366 598 ntTSL 5 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 AC004945.1-201ENST00000416738 983 ntBASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 AC026434.2-201ENST00000506094 1078 ntBASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 AP001258.2-201ENST00000529891 490 ntBASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 MIR4783-201ENST00000580343 82 ntBASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC23.81■■□□□ 1.4
FYCO1Q9BQS8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 AC138028.6-201ENST00000616106 1482 ntBASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 AC244157.2-201ENST00000616239 1006 ntBASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
FYCO1Q9BQS8 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 REXO1L5P-201ENST00000622260 2098 ntBASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 BX284668.4-201ENST00000453917 508 ntBASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 ACTG1P17-201ENST00000558391 1119 ntBASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FYCO1Q9BQS8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 NDUFAB1P1-201ENST00000404262 460 ntBASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FYCO1Q9BQS8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 HIST2H2BC-201ENST00000498492 580 ntBASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FYCO1Q9BQS8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms