Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CMSS1Q9BQ75 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CMSS1Q9BQ75 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AC004870.1-201ENST00000315132 882 ntBASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 RNA5SP415-201ENST00000517246 115 ntBASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 AC117489.1-201ENST00000625169 3217 ntBASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.49□□□□□ -0.25
CMSS1Q9BQ75 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC025580.3-201ENST00000617932 1424 ntBASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 BCAR1-209ENST00000546196 1340 ntBASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC024267.1-201ENST00000582320 895 ntBASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CMSS1Q9BQ75 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms