Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DDX11Q96FC9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 BTBD7P1-201ENST00000447253 1453 ntBASIC18.65■□□□□ 0.58
DDX11Q96FC9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 AC103702.1-201ENST00000548801 2630 ntBASIC18.65■□□□□ 0.58
DDX11Q96FC9 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 KRT17P7-201ENST00000451704 1104 ntBASIC18.65■□□□□ 0.58
DDX11Q96FC9 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.65■□□□□ 0.58
DDX11Q96FC9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DDX11Q96FC9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
DDX11Q96FC9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.64■□□□□ 0.58
DDX11Q96FC9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX11Q96FC9 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC18.64■□□□□ 0.58
DDX11Q96FC9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
DDX11Q96FC9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 GNAQP1-201ENST00000444815 1067 ntBASIC18.64■□□□□ 0.57
DDX11Q96FC9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 SERBP1P3-201ENST00000459980 809 ntBASIC18.64■□□□□ 0.57
DDX11Q96FC9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 AC020658.6-201ENST00000623564 1870 ntBASIC18.64■□□□□ 0.57
DDX11Q96FC9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CU639417.3-201ENST00000624240 1404 ntBASIC18.64■□□□□ 0.57
DDX11Q96FC9 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DDX11Q96FC9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
DDX11Q96FC9 CYP4F24P-201ENST00000586049 1580 ntBASIC18.64■□□□□ 0.57
DDX11Q96FC9 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ZNF890P-202ENST00000530367 1156 ntBASIC18.63■□□□□ 0.57
DDX11Q96FC9 API5-211ENST00000534695 560 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DDX11Q96FC9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
DDX11Q96FC9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms