Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 MIR346-201ENST00000362234 95 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC142381.1-201ENST00000426099 345 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 RBPMS2P1-201ENST00000437762 623 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 HLA-J-203ENST00000494367 1087 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC109322.1-201ENST00000524499 1264 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.31■□□□□ 0.04
NCLNQ969V3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC093028.1-201ENST00000622998 982 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC084121.4-201ENST00000641598 221 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 AF228730.8-201ENST00000642140 221 ntBASIC15.31■□□□□ 0.04
NCLNQ969V3 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NCLNQ969V3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.31■□□□□ 0.04
NCLNQ969V3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NCLNQ969V3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.3■□□□□ 0.04
NCLNQ969V3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.3■□□□□ 0.04
NCLNQ969V3 HAUS4P1-201ENST00000406739 1145 ntBASIC15.3■□□□□ 0.04
NCLNQ969V3 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.3■□□□□ 0.04
NCLNQ969V3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.3■□□□□ 0.04
NCLNQ969V3 GPS2P2-201ENST00000430745 888 ntBASIC15.3■□□□□ 0.04
NCLNQ969V3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
NCLNQ969V3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.3■□□□□ 0.04
NCLNQ969V3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
NCLNQ969V3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.3■□□□□ 0.04
NCLNQ969V3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.3■□□□□ 0.04
NCLNQ969V3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 AC020658.6-201ENST00000623564 1870 ntBASIC15.3■□□□□ 0.04
NCLNQ969V3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NCLNQ969V3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NCLNQ969V3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
NCLNQ969V3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms