Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AL136982.4-201ENST00000437689 1740 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 TIMM17BP1-201ENST00000545713 516 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC023310.3-201ENST00000557027 670 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC100756.1-201ENST00000562736 682 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 WASH4P-201ENST00000564273 1246 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC138749.3-201ENST00000567691 622 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC092337.1-201ENST00000568699 1129 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AC116165.1-201ENST00000611806 668 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ATP2A3Q93084 AL365209.1-201ENST00000624418 6473 ntBASIC16.57■□□□□ 0.24
ATP2A3Q93084 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
ATP2A3Q93084 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 U91328.1-201ENST00000437528 223 ntBASIC16.56■□□□□ 0.24
ATP2A3Q93084 ATP5G2P4-201ENST00000442175 420 ntBASIC16.56■□□□□ 0.24
ATP2A3Q93084 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 MYCLP2-201ENST00000449268 967 ntBASIC16.56■□□□□ 0.24
ATP2A3Q93084 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
ATP2A3Q93084 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.56■□□□□ 0.24
ATP2A3Q93084 IGHV3-72-202ENST00000621503 303 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms