Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RTN4IP1Q8WWV3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 TFAMP1-201ENST00000412727 736 ntBASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 DNAJB3-201ENST00000446806 729 ntBASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.27□□□□□ -0.29
RTN4IP1Q8WWV3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 HTR5BP-201ENST00000430851 1154 ntBASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 ADH5P3-201ENST00000433842 1137 ntBASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 MIR4321-201ENST00000592276 80 ntBASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 AC005089.1-201ENST00000619486 2241 ntBASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RTN4IP1Q8WWV3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.25□□□□□ -0.29
RTN4IP1Q8WWV3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms