Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AC079140.1-201ENST00000508039 487 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 KRT8P48-201ENST00000515599 1220 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SLC25A1P1-201ENST00000528351 927 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AC084121.4-201ENST00000641598 221 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AF228730.8-201ENST00000642140 221 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 ZNF259P1-201ENST00000407656 1365 ntBASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SLC44A1Q8WWI5 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AL359258.3-201ENST00000622910 2331 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC140479.7-201ENST00000636301 2332 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SPDYE11-202ENST00000450699 704 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 KRT18P3-201ENST00000451602 1288 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SPDYE9P-201ENST00000570642 692 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC140113.2-201ENST00000604370 208 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC026120.1-201ENST00000611536 926 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SPDYE10P-202ENST00000612005 668 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SPDYE8P-202ENST00000612377 668 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC068587.6-202ENST00000641839 5619 ntBASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.72■□□□□ 0.11
SLC44A1Q8WWI5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SLC44A1Q8WWI5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms