Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AL603764.1-201ENST00000636452 321 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FAU-202ENST00000434372 533 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FAM90A7P-201ENST00000382628 1395 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FAM90A23P-201ENST00000400136 1395 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AC092171.3-201ENST00000610122 2651 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 AL157407.1-201ENST00000435784 904 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PFN2-206ENST00000461930 606 ntTSL 4 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 LINC00634-202ENST00000505157 222 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 PLS3-210ENST00000626746 216 ntTSL 4 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 LINC00431-202ENST00000636375 159 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 SHC1P1-201ENST00000425230 1745 ntBASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
ALMS1Q8TCU4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 DUX4L46-201ENST00000566845 751 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 FO393412.1-201ENST00000619841 382 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AC244394.1-201ENST00000435000 1665 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PSMD4P1-201ENST00000433951 1109 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 FAM58BP-201ENST00000439056 645 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AL136295.7-201ENST00000619226 1200 ntBASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 AC015909.3-201ENST00000572855 1794 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms