Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 AC079781.3-201ENST00000449110 356 ntBASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 AC073648.2-201ENST00000510116 352 ntBASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RAB3IL1Q8TBN0 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 LINC00552-201ENST00000625151 2579 ntBASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 AC009078.2-202ENST00000463353 338 ntBASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.71■□□□□ 0.11
RAB3IL1Q8TBN0 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB3IL1Q8TBN0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 ZBED1P1-201ENST00000502364 1930 ntBASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 AF238378.1-201ENST00000526806 358 ntBASIC15.7■□□□□ 0.1
RAB3IL1Q8TBN0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms