Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 TPRX2P-201ENST00000535362 881 ntBASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AC092364.2-202ENST00000597012 1073 ntBASIC16.59■□□□□ 0.25
UBA3Q8TBC4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 AC073347.1-201ENST00000421633 2643 ntBASIC16.59■□□□□ 0.25
UBA3Q8TBC4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBA3Q8TBC4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 AL162727.3-201ENST00000635661 2787 ntBASIC16.58■□□□□ 0.25
UBA3Q8TBC4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.58■□□□□ 0.25
UBA3Q8TBC4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 NFIC-211ENST00000641145 8399 ntBASIC16.58■□□□□ 0.24
UBA3Q8TBC4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 AC004233.3-201ENST00000607794 1269 ntBASIC16.58■□□□□ 0.24
UBA3Q8TBC4 AL158212.4-201ENST00000624062 1286 ntBASIC16.58■□□□□ 0.24
UBA3Q8TBC4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 AL121723.1-201ENST00000445194 1519 ntBASIC16.58■□□□□ 0.24
UBA3Q8TBC4 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
UBA3Q8TBC4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 AC138969.3-201ENST00000546612 1459 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 AC138932.2-201ENST00000548268 1459 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 AC126755.4-201ENST00000549796 1459 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 AC007541.1-201ENST00000570282 1469 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 FAM207CP-201ENST00000443486 507 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 PPT1-215ENST00000641471 2368 ntBASIC16.57■□□□□ 0.24
UBA3Q8TBC4 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
UBA3Q8TBC4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
UBA3Q8TBC4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.56■□□□□ 0.24
UBA3Q8TBC4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.56■□□□□ 0.24
UBA3Q8TBC4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms