Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 HNRNPUP1-201ENST00000554987 333 ntBASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 AC022145.2-201ENST00000598203 171 ntBASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 AL671883.3-201ENST00000603274 991 ntBASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLHC1Q8NHS4 ELL2P1-201ENST00000413990 1906 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC007686.3-201ENST00000619017 3487 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CICP24-201ENST00000605464 2705 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC106881.1-201ENST00000605849 3329 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AZGP1P1-201ENST00000411909 902 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC026979.3-201ENST00000607315 403 ntBASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLHC1Q8NHS4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 FAM58DP-201ENST00000428076 619 ntBASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CLHC1Q8NHS4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms