Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 UGT1A2P-201ENST00000454886 866 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 SPDYE18-201ENST00000510091 1050 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 SRD5A3P1-201ENST00000603021 949 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 RNA5-8SN1-201ENST00000610460 153 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 RNA5-8SN5-202ENST00000612463 153 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 RNA5-8SN4-201ENST00000613359 153 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 RNA5-8SN5-201ENST00000619471 153 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 AC067930.6-201ENST00000623257 4947 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 AC105250.1-201ENST00000509378 2057 ntBASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC148Q8NFR7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AC020658.6-201ENST00000623564 1870 ntBASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AC092850.2-201ENST00000623821 2697 ntBASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC148Q8NFR7 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AL133267.1-201ENST00000398220 340 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 FAM207CP-201ENST00000443486 507 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 KRT18P43-201ENST00000469825 1281 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 MEIS3P1-201ENST00000495167 958 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AC138969.3-201ENST00000546612 1459 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AC138932.2-201ENST00000548268 1459 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 AC126755.4-201ENST00000549796 1459 ntBASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CCDC148Q8NFR7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms