Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 DDX39AP1-201ENST00000445147 1181 ntBASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 AC100850.1-201ENST00000506768 649 ntBASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 BNIP3P13-201ENST00000599968 566 ntBASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CCDC168Q8NDH2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 AL022344.2-201ENST00000568976 968 ntBASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.96□□□□□ -0.33
CCDC168Q8NDH2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AL157792.1-201ENST00000488281 530 ntBASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AC092171.5-201ENST00000608012 942 ntBASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 AC242376.2-201ENST00000619355 883 ntBASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
CCDC168Q8NDH2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AC106794.1-201ENST00000506935 792 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 RN7SL596P-201ENST00000582123 288 ntBASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCDC168Q8NDH2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms