Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 IL9RP2-201ENST00000423948 1312 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AC105339.3-201ENST00000560043 636 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AC012640.2-201ENST00000561606 901 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AL009183.1-201ENST00000603760 355 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 ZBED1P1-201ENST00000502364 1930 ntBASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRIM42Q8IWZ5 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC023024.2-201ENST00000623561 1993 ntBASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AL022342.1-201ENST00000400363 863 ntBASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AP000347.1-202ENST00000435868 847 ntBASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 PRSS29P-201ENST00000440800 595 ntBASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC092910.1-201ENST00000482027 1129 ntBASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TRIM42Q8IWZ5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms