Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 ZNF436-AS1-201ENST00000335648 2547 ntBASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 CYP4F23P-201ENST00000593402 1579 ntBASIC19.2■□□□□ 0.66
RGPD4Q7Z3J3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AL807761.2-201ENST00000422849 729 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 TSPY25P-201ENST00000429463 745 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 RNF165-205ENST00000588679 2904 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AL512306.1-201ENST00000432698 848 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AREG-202ENST00000502307 956 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 LINC01783-202ENST00000614408 828 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 BX284668.2-205ENST00000619677 828 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AC133540.1-201ENST00000620845 1019 ntBASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RGPD4Q7Z3J3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 RPSAP15-201ENST00000448168 861 ntBASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 AC244197.1-201ENST00000456494 951 ntBASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 AC009884.2-201ENST00000603110 324 ntBASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 LINC00431-202ENST00000636375 159 ntBASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 AC005052.1-201ENST00000625181 2492 ntBASIC19.18■□□□□ 0.66
RGPD4Q7Z3J3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 AL133373.2-201ENST00000623187 2828 ntBASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.17■□□□□ 0.66
RGPD4Q7Z3J3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms