Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CASC4Q6P4E1 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PHKG1P2-201ENST00000457537 863 ntBASIC16.06■□□□□ 0.16
CASC4Q6P4E1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 RARRES2P9-201ENST00000565168 469 ntBASIC16.06■□□□□ 0.16
CASC4Q6P4E1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CASC4Q6P4E1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 AC055717.3-201ENST00000622967 595 ntBASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 AC112693.3-201ENST00000624819 1983 ntBASIC16.05■□□□□ 0.16
CASC4Q6P4E1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 ELL2P1-201ENST00000413990 1906 ntBASIC16.05■□□□□ 0.16
CASC4Q6P4E1 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 ABR-205ENST00000544583 5595 ntTSL 2 BASIC16.05■□□□□ 0.16
CASC4Q6P4E1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
CASC4Q6P4E1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms