Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 VDAC1P1-201ENST00000439229 848 ntBASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 AL805961.1-203ENST00000641078 1258 ntBASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
CDC42BPAQ5VT25 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 RNF165-205ENST00000588679 2904 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 AC092127.1-201ENST00000567093 3455 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 RN7SKP230-201ENST00000365642 335 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 U62317.3-201ENST00000608319 855 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 MIR6727-201ENST00000620702 65 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 AL138725.1-201ENST00000407347 1314 ntBASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42BPAQ5VT25 STK33-217ENST00000534493 1895 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 RN7SL181P-201ENST00000462921 277 ntBASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AC092978.1-202ENST00000637590 1327 ntBASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42BPAQ5VT25 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 AL008707.1-201ENST00000422498 534 ntBASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 MIR5572-201ENST00000583188 137 ntBASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CDC42BPAQ5VT25 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 E2F3P2-201ENST00000447755 1422 ntBASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 AC253536.4-201ENST00000440539 267 ntBASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 AL133466.1-201ENST00000447582 150 ntBASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 LDHBP1-201ENST00000455730 1119 ntBASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 RCC2P8-201ENST00000502779 1035 ntBASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42BPAQ5VT25 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42BPAQ5VT25 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms