Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 AC114812.1-204ENST00000449669 728 ntBASIC13.35□□□□□ -0.27
LRRK2Q5S007 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.35□□□□□ -0.27
LRRK2Q5S007 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRK2Q5S007 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 AL133373.2-201ENST00000623187 2828 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 AC026320.2-201ENST00000434379 478 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 CHCHD2P9-201ENST00000461726 456 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 AC009779.1-201ENST00000551138 283 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 AL450472.2-201ENST00000603663 1156 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 OR10B1P-201ENST00000601666 907 ntBASIC13.34□□□□□ -0.27
LRRK2Q5S007 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LRRK2Q5S007 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LRRK2Q5S007 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LRRK2Q5S007 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LRRK2Q5S007 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRK2Q5S007 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LRRK2Q5S007 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 RPL8P2-201ENST00000430538 502 ntBASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 PHBP15-201ENST00000574228 665 ntBASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.33□□□□□ -0.28
LRRK2Q5S007 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LRRK2Q5S007 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LRRK2Q5S007 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LRRK2Q5S007 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms